PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do002349.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 351aa    MW: 37099.5 Da    PI: 5.7474
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do002349.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.7e-09166213455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k + Ka +L + ++Y++sLq
  Do002349.1 166 SHSLAERVRREKISQRMKFLQDLVPGC----NKVVGKALMLDEIINYVQSLQ 213
                 8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.82E-10160217No hitNo description
SuperFamilySSF474597.07E-17160231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.6E-17162230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.123162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.5E-6166213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.4E-9168218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MDSDYVASLL MGHSAAPGLD FAALDGGFLD TLCGGGSLFG LPGVAAGGGG SGGSPEGSSV  60
SDPAWARARD GGNARKRKAP PAGAAGGKEA AGLGKAGEAK GPDGKKGRVG AGDSTVKPKV  120
EEATASDGSV EDKGQKKGKG KSSKPPVEPP KDYVHVRARR GQATDSHSLA ERVRREKISQ  180
RMKFLQDLVP GCNKVVGKAL MLDEIINYVQ SLQQQVEFLS MKLATVNPQL DFSNLSTLLH  240
KDMYQACGPS LNSVFPLESA GAAFPFCDQA DLFQSFGSGG MQDQCYLRLL ETALPHTTNP  300
QFAFQKQQRD FWEEDLQNTL PIVNEQSQEE NGISVPNFDG QLQADQTKAE V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151910.10.0BHLH transcription factor
SwissprotQ9CAA91e-56BH049_ARATH; Transcription factor bHLH49
TrEMBLB6U6D00.0B6U6D0_MAIZE; BHLH transcription factor
STRINGGRMZM2G144275_P040.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.25e-54bHLH family protein